Baked Egg Bites are a handheld, high-protein, delicious breakfast or snack on the go. Easy to make and even easier to enjoy, try these awesome little nuggets once and you'll make them again and again.
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And, if you're in the mood for more easy breakfast and brunch recipes, you've come to the right place! Try my Egg Muffins, Pigs In A Blanket, or my Zucchini Bread Muffins!

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If you're like me, you love egg bites from the oh so popular coffee place we all know. They're fantastic. They're also very expensive and full of weird ingredients. No one needs that. Not me, not you, not nobody.
My baked egg bites are identical to the aforementioned version. The texture is light and fluffy and delicate. The gruyere and bacon is my favorite flavor combination, but I have list of options for you below to experiment with. All the flavor, the perfect texture, and easier on that pocket book and better for you! What's not to like about that?!
This recipe is great for a quick breakfast and a perfect after school snack. I even love them for lunch with a simple green salad on the side. Baked egg bites store exceptionally well in the fridge or freezer and taste great once reheated. Make them now. You can thank me later.
What You'll Need
- Bacon, Gruyere, Eggs - Bacon, cheese, and eggs make up some of my favorite things. You can use whatever cheese you like and your favorite brand of bacon.
- Full Fat/Whole Milk Cottage Cheese - Adds protein and gives the baked egg bites the smooth texture we are going after.
- Granulated Onion and Granulated Garlic - Seasoning basics.
- Chives - For a little more flavor and color.
Tools of the Trade: You Don't Need Anything Special
I am not a big fan of gadgets in the kitchen. I just don't need anymore stuff anywhere in my life. Ya know?! You can buy a silicone mold for these baked egg bites so they will look just like the ones from the coffee spot. But, ya don't need to.
You can, however, do this with some cupcake liners and a muffin tin. I would not suggest buying something just for this one recipe when you probably have liners and a tin at home. Keep it simple and save your money.

How To Make Them
These egg bites are so easy and so fun to make, I promise you'll do them all the time. I'm going to give you the basic rundown here, but the specifics will live in the recipe card below. All you have to do is!
- Make the egg mixture.
- Cook the bacon and add it to the mix.
- Water bath and bake.
- That. Is. it.
Let them cool just a bite, top with your favorite hot sauce, and enjoy!
What Is A Water Bath?
What is a water bath, you ask? A water bath, also known as a bain-marie, is simply a way of baking by placing a pan of very hot water into the oven along with a dish containing the food being baked. For the egg bites, it helps keep them super moist and evenly cooked. Which is just what we want!
For these baked egg bites, you will carefully place the muffin tins onto a baking sheet with a lip. Also, verrrrrry carefully, pour almost boiling water into the baking sheet about halfway up the sides of the muffin tins. Place the baking sheet with the muffin tins into a 325° oven for about 30 minutes.
After 30 minutes, the baked egg bites should be just set. Don't over bake them. Carefully, remove the baking sheet from the oven (the water is still hot and can slosh). Remove the muffins tins and let the egg bites cool just a few minutes.
When the water cools, just discard it. And, that's how you do a water bath!

Frequently Asked Questions
What if I don't like cottage cheese?
I get it. Cottage cheese can be a bit odd. However, once blended into the eggs, you cannot tell it's there. The cottage cheese helps to create that wonderfully fluffy texture that we all love, so I highly suggest you try it. And, it adds a good protein bump that is also a big plus!
Can I use low-fat cottage cheese?
You can, but I'll tell you why I don't. I prefer whole milk/full fat dairy. When manufacturers make low-fat dairy products, they have to replace the removed fat with something. That something is usually sugars. Without doing that, the low fat version of whatever won't taste good. Fat is not your enemy. Unnecessary sugar can be.
Storage and Reheating Instructions
These egg bites will stay good in the fridge, in an airtight container, for up to 4 days. Reheat them in the microwave 25-30 seconds.
Freezer Instructions: Once cooled after baking, freeze the egg bites on a parchment line baking sheet. Once frozen, add them to an zip top bag. They'll stay good in the freezer 2-3 months. All you need to do is thaw them in the fridge once you're ready for them. Into the microwave for 25-30 seconds and they'll be perfect!
Tips and Tricks
Be mindful of bubbles and don't over-blend. While blending the egg bite mixture, bubbles will form. The mixture should be smooth, but I like to let mine sit a few minutes to allow the bubbles to dissipate. Too much air and your egg bites might deflate like a sad tire in the end. Let those bubbles go away and everything will be great.
Be careful of the hot water in the water bath. Be mindful that hot water can burn. It's so easy to get distracted. I know. I have two kids, a loud dog, and a chatty husband. I highly suggest placing the baking sheet onto the baking rack in the oven, placing the muffin tin on the baking sheet, and then pouring the hot water in. It helps prevent unnecessary sloshing.
Variations and Substitutions
Bacon and gruyere are my favorite egg bite combinations. However, this is one of the easiest and most fun recipes to customize.
- If you don't like gruyere, try Monterrey jack, cheddar, or pepper jack. I also looooove using Gouda here!
- Sautéed veggies like onions, peppers, or mushrooms would be amazing. I would keep it to a maximum of about 1 cup of sautéed things to keep the baked egg bites from falling apart.
- Swap the bacon protein for ham, prosciutto, or sausage crumbles.
- And, as a salsa aficionado, I think a drained dollop of pico de gallo before baking would be chef's kiss.
- Top will extra chives, fresh jalapeños, hot sauce, or a dollop of sour cream for serving.
- I could go on and on and on and on...


Baked Egg Bites Recipe
Ingredients
- 4 pieces bacon, diced
- 8 eggs, room temperature
- 1 cup whole milk cottage cheese
- 1½ cups gruyere, shredded plus a little extra for topping
- ¼ teaspoon granulated garlic
- ¼ teaspoon granulated onion
- 2 tablespoon chives, minced
- kosher salt and fresh ground pepper, to taste
Instructions
- Preheat the oven to 325°.
- Add the eggs, cottage cheese, gruyere, granulated onion and garlic, salt and pepper to a blender and blend until smooth.
- Line a 12-muffin muffin tin with cupcake liners, pour the egg bite mixture almost to the top. Let this sit a few minutes to allow the bubbles to dissipate.
- Cook the bacon on medium-high heat until crispy.
- Drain off any excess fat from the bacon and spoon the pieces evenly over the tops of the egg bites. Top with a little extra cheese and fresh chives.
- Carefully place the filled muffin tins onto a baking sheet with a lip. Also, verrrrrry carefully, pour almost boiling water into the baking sheet about halfway up the sides of the muffin tins. Place the baking sheet with the muffin tins into a 325° oven for about 30 minutes.
- After 30 minutes, the egg bites should be just set. Don't over bake them. Carefully, remove the baking sheet from the oven (the water is still hot and can slosh). Remove the muffins tins and let the egg bites cool just a few minutes.
- Enjoy!
Nutrition
If you guys make this Baked Egg Bites, be sure to leave a comment and/or give this recipe a rating! I absolutely love to hear from you all and always do my best to respond to each and every one of your comments!
Thank you!
I am so incredibly happy that you are here! I hope you try my Baked Egg Bites recipe and fall in love with it. If you make this recipe, please share and tag me on Instagram, Facebook, or TikTok! And, please leave a comment or a star rating below. I absolutely love seeing each and every one of your kitchen masterpieces. And, as always, if you ever have any questions about any of my recipes, please don't hesitate to contact me!
Happy Cooking!
-Rufus
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Jane says
These are our go-to breakfasts now. My kids love them. I make them spicier for my husband and myself. They’re quick and easy. Thank you!
Rufus says
Yay! So glad you liked it! Thanks for letting me know!